Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887987.1_cds_XP_016442518.1_37773
CDS Infomation

[gene=LOC107767919] [db_xref=GeneID:107767919] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016442518.1] [location=complement(join(42814..43431,43509..44390))] [gbkey=CDS]
Sequence

ATGGAGTTTCAACACTTGGTTTCGTTCTTGCTATTCATCTCCTTCATCTTTCTTCTGATT
CAAAAATGGAGGAAATCGAAAAGGCTTCCACCTGGTCCGTGGAGGCTACCTATTATTGGA
AGTGTGCATCACTTGACAAGTGGAGTATCACATCGAGTTCTCAGAAATTTATCACAAAAG
TTTGGCCCAATCATGTACTTACAGCTCGGGGAAGTTCCAACAGTAGTTGTATCCTCCCCA
CACATGGCCAAACAAATTTTAAAAACTCACGACCTCGCTTTTGCATCTAGGCCAGAAATC
ATGATGGGAAAAATTATTTGTTACGATTGTAAGGACATTGCCTTTTCCCCATATGGTGAT
TATTGGAGACATATGCGTAAACTGAGCACCTTGGAACTACTTAGTGCCAAGATGGTGAAG
TCCTTCAGTCCAATTCGACGTGATGAGCTCTCAAGTCTCCTATCATCCATTGAATCAATG
GGAGATTTGCCAATCAACTTAGTAGAAAAACTTTTATGGTTTATGAATGCCGCGACATGT
AGGTCAGCATTTGGGAAAGTGTGTAAAGATCAAAAAGAGTTGATAACATTGATTCATCGA
GCACAATCATTATCTGGTGGATTCGAGCTGGCTGATTTGTTCCCTTCGAAAAAGTTTCTA
CATGGTATTAGTGGGATGCGGTCTAAACTAATGGAAGCTCGTAATAAGATAGACGTGGTC
TTGGACAACATTATCAATGTGCACAGAGAGAATCGGGCAAATGGAAAATGTTGTAATGGT
GAGTCCGGAGCTGAAGATTTCATCGATGTTTTTCAAAGAGTCATGGAGAGCGGCGAATTA
CCATTTCCTCTAGAAAATGATAACATCAAAGCAGTTATTCTTGACATGTTCGTAGCAGGG
TCTGACACATCATCTTCAACCGTTATTTGGGCATTAGCAGAAATGATAAAGAATCCAAGT
GTAATGGCGAAAGCACAAGCAGAAGTGAGAGAAGCTTTTAAAGGAAAGAAAACATGTGAT
GAGGATACTGATCTTGAAAAGCTTAGTTACCTAAATTTAGTGATCAAAGAGACACTCCGA
TTACACCCTCCAACTCCTCTACTTGTCCCGCGAGAATGCAGGGAGGAAACAGAGATTGAT
GGATTCACTATACCGTTGAAAAGCAAAGTCTTGGTTAACGTATGGGCAATTGGAAGAGAT
CCCGAGAATTGGGGAAATCCTGAATGTTTTATACCAGAGAGATTCGAAAATAGTTCTATT
GAGTTTACTGGAAATCATTTTCAACTTCTTCCCTTTGGCGCGGGAAGACGAATTTGTCCA
GGAATACAATTTGGTATGGCTCTTGTTACTCTGCCATTGGCACATTTGCTTCACAACTTT
GATTGGAAACTTCCCGAAGGAATTAATGCAAGGGATTTGGACATGACTGAGGCAAATGGA
ATATCTGCTAGAAGAGAGAAAGATCTTTACTTGATTGCTACTCCTTGTGTCGCGTCTTGA

Peptide Sequence

PEP ID

XP_016442518.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEFQHLVSFLLFISFIFLLIQKWRKSKRLPPGPWRLPIIGSVHHLTSGVSHRVLRNLSQK
FGPIMYLQLGEVPTVVVSSPHMAKQILKTHDLAFASRPEIMMGKIICYDCKDIAFSPYGD
YWRHMRKLSTLELLSAKMVKSFSPIRRDELSSLLSSIESMGDLPINLVEKLLWFMNAATC
RSAFGKVCKDQKELITLIHRAQSLSGGFELADLFPSKKFLHGISGMRSKLMEARNKIDVV
LDNIINVHRENRANGKCCNGESGAEDFIDVFQRVMESGELPFPLENDNIKAVILDMFVAG
SDTSSSTVIWALAEMIKNPSVMAKAQAEVREAFKGKKTCDEDTDLEKLSYLNLVIKETLR
LHPPTPLLVPRECREETEIDGFTIPLKSKVLVNVWAIGRDPENWGNPECFIPERFENSSI
EFTGNHFQLLPFGAGRRICPGIQFGMALVTLPLAHLLHNFDWKLPEGINARDLDMTEANG
ISARREKDLYLIATPCVAS

Transcript Sequence

Gene sequence data has not been registered.